SIDRA
Sample Set Annotation Tool
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Culture conditions
New Group
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Groups
Control
400002401: GSM632331
400002402: GSM632332
400002627: GSM632557
400002674: GSM632604
0
samples selected
Move selected samples to group
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
PMAIono
400002414: GSM632344
400002546: GSM632476
400002585: GSM632515
400002638: GSM632568
0
samples selected
Move selected samples to group
Control
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
PAM2
400002512: GSM632442
400002526: GSM632456
400002611: GSM632541
400002659: GSM632589
0
samples selected
Move selected samples to group
Control
PMAIono
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
PAM3
400002517: GSM632447
400002520: GSM632450
400002600: GSM632530
400002647: GSM632577
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
PolyIC
400002476: GSM632406
400002513: GSM632443
400002635: GSM632565
400002671: GSM632601
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
LPS
400002497: GSM632427
400002537: GSM632467
400002599: GSM632529
400002649: GSM632579
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
Flagellin
400002388: GSM632318
400002418: GSM632348
400002636: GSM632566
400002651: GSM632581
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
3M2
400002392: GSM632322
400002549: GSM632479
400002575: GSM632505
400002583: GSM632513
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
3M13
400002483: GSM632413
400002487: GSM632417
400002560: GSM632490
400002584: GSM632514
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
R848
400002495: GSM632425
400002527: GSM632457
400002563: GSM632493
400002628: GSM632558
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
CpG C
400002421: GSM632351
400002550: GSM632480
400002556: GSM632486
400002637: GSM632567
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
CpGD19
400002410: GSM632340
400002506: GSM632436
400002573: GSM632503
400002574: GSM632504
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
R6
400002522: GSM632452
400002544: GSM632474
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
R8450
400002492: GSM632422
400002530: GSM632460
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
R11470
400002416: GSM632346
400002422: GSM632352
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
SAC
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
SAC
400002403: GSM632333
400002409: GSM632339
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
IL1b
L18
IL33
TNFa
Move
Create sample set from this group
IL1b
400002389: GSM632319
400002405: GSM632335
400002569: GSM632499
400002641: GSM632571
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
L18
IL33
TNFa
Move
Create sample set from this group
L18
400002490: GSM632420
400002548: GSM632478
400002562: GSM632492
400002658: GSM632588
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
IL33
TNFa
Move
Create sample set from this group
IL33
400002481: GSM632411
400002532: GSM632462
400002588: GSM632518
400002662: GSM632592
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
TNFa
Move
Create sample set from this group
TNFa
400002398: GSM632328
400002408: GSM632338
400002564: GSM632494
400002675: GSM632605
0
samples selected
Move selected samples to group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
Move
Create sample set from this group
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Are you sure you want to delete this group?
New Group
Name
Split Group Set
Split Using
!Sample Title
Age at enrollment
Cell population
Gender
Geographic
Illness
In vitro stimulation blood volume per condition
In vitro stimulation condition
In vitro stimulation incubation time
Race
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Name
Display Order
Move
Move this group to
before
after
Control
PMAIono
PAM2
PAM3
PolyIC
LPS
Flagellin
3M2
3M13
R848
CpG C
CpGD19
R6
R8450
R11470
SAC
IL1b
L18
IL33
TNFa
Move
Color
Create Groups
Split by
!Sample Title
Age at enrollment
Cell population
Gender
Geographic
Illness
In vitro stimulation blood volume per condition
In vitro stimulation condition
In vitro stimulation incubation time
Race
(split into
72
groups)
Ex:
MYD88 P2_No stimulation, MYD88 P1_PAM2, MYD88 P3_IL-1b, MYD88 P1_polyIC, MYD88 P2_CpG-D19
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release