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Clinical

Expression data from Treg subsets sorted from healthy human peripheral blood-GSE64176

Purpose

All the sorted Treg cells are gated on CD4+CD25+CD127(low), followed by gating on various subsets using markers indicated in the sample names.All the sorted Teff cells are gated on CD4+CD25-CD127(hi), and further sorted for CD45RO- and CD45RO+ phenotype.

Hypothesis

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Experimental Design

Each Treg and Teff cell subsets were sorted from three different donors. We sought to identify gene expression signature characteristic to specific Treg subsets

Experimental Variables

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Controls

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Methods

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Additional Information
  • Hua J, Davis SP, Hill JA, Yamagata T. Diverse Gene Expression in Human Regulatory T Cell Subsets Uncovers Connection between Regulatory T Cell Genes and Suppressive Function. J Immunol 2015 Oct 15;195(8):3642-53. PMID: 26371251
  • Microarray
    Affymetrix HuGene 1.0 ST v1
    124 Samples Loaded: 124
    Human (Homo sapiens)
    Regulatory T Cells
    Healthy
    Sample Set Spreadsheet
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    Samples Preview
    Sample ID !Sample_title cell type sample type Day
    GSM1565815 Treg.CD45RO+.CCR7-.CCR6+.rep1 Treg CD45RO+ CCR7- CCR6+ Sorted ex vivo Treg subset NA
    GSM1565816 Treg.CD45RO+.CCR7-.CCR6+.rep2 Treg CD45RO+ CCR7- CCR6+ Sorted ex vivo Treg subset NA
    GSM1565817 Treg.CD45RO+.CCR7-.CCR6+.rep3 Treg CD45RO+ CCR7- CCR6+ Sorted ex vivo Treg subset NA
    GSM1565818 Treg.CD45RO+.CCR7+.CCR6-.rep1 Treg CD45RO+ CCR7+ CCR6- Sorted ex vivo Treg subset NA
    GSM1565819 Treg.CD45RO+.CCR7+.CCR6-.rep2 Treg CD45RO+ CCR7+ CCR6- Sorted ex vivo Treg subset NA
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    File
    sampleset4000037_sampleannotations.csv
    Sample Set Spreadsheet
    Raw Signal
    Raw Signal
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    Sample ID !Sample Title Cell type Sample type Day
    GSM1565815
    Treg.CD45RO+.CCR7-.CCR6+.rep1
    Treg CD45RO+ CCR7- CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565816
    Treg.CD45RO+.CCR7-.CCR6+.rep2
    Treg CD45RO+ CCR7- CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565817
    Treg.CD45RO+.CCR7-.CCR6+.rep3
    Treg CD45RO+ CCR7- CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565818
    Treg.CD45RO+.CCR7+.CCR6-.rep1
    Treg CD45RO+ CCR7+ CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565819
    Treg.CD45RO+.CCR7+.CCR6-.rep2
    Treg CD45RO+ CCR7+ CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565820
    Treg.CD45RO+.CCR7+.CCR6-.rep3
    Treg CD45RO+ CCR7+ CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565821
    Treg.CD45RO+.CCR7+.CCR6+.rep1
    Treg CD45RO+ CCR7+ CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565822
    Treg.CD45RO+.CCR7+.CCR6+.rep2
    Treg CD45RO+ CCR7+ CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565823
    Treg.CD45RO+.CCR7+.CCR6+.rep3
    Treg CD45RO+ CCR7+ CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565824
    Treg.CD45RO+.CD101-.rep1
    Treg CD45RO+ CD101-
    Sorted ex vivo Treg subset
    NA
    GSM1565825
    Treg.CD45RO+.CD101-.rep2
    Treg CD45RO+ CD101-
    Sorted ex vivo Treg subset
    NA
    GSM1565826
    Treg.CD45RO+.CD101-.rep3
    Treg CD45RO+ CD101-
    Sorted ex vivo Treg subset
    NA
    GSM1565827
    Treg.CD45RO+.CD101-.rep4
    Treg CD45RO+ CD101-
    Sorted ex vivo Treg subset
    NA
    GSM1565828
    Treg.CD45RO+.CD101+.rep1
    Treg CD45RO+ CD101+
    Sorted ex vivo Treg subset
    NA
    GSM1565829
    Treg.CD45RO+.CD101+.rep2
    Treg CD45RO+ CD101+
    Sorted ex vivo Treg subset
    NA
    GSM1565830
    Treg.CD45RO+.CD101+.rep3
    Treg CD45RO+ CD101+
    Sorted ex vivo Treg subset
    NA
    GSM1565831
    Treg.CD45RO+.CD101+.rep4
    Treg CD45RO+ CD101+
    Sorted ex vivo Treg subset
    NA
    GSM1565832
    Treg.CD45RO+.CD109-.rep1
    Treg CD45RO+ CD109-
    Sorted ex vivo Treg subset
    NA
    GSM1565833
    Treg.CD45RO+.CD109-.rep2
    Treg CD45RO+ CD109-
    Sorted ex vivo Treg subset
    NA
    GSM1565834
    Treg.CD45RO+.CD109-.rep3
    Treg CD45RO+ CD109-
    Sorted ex vivo Treg subset
    NA
    GSM1565835
    Treg.CD45RO+.CD109+.rep1
    Treg CD45RO+ CD109+
    Sorted ex vivo Treg subset
    NA
    GSM1565836
    Treg.CD45RO+.CD109+.rep2
    Treg CD45RO+ CD109+
    Sorted ex vivo Treg subset
    NA
    GSM1565837
    Treg.CD45RO+.CD109+.rep3
    Treg CD45RO+ CD109+
    Sorted ex vivo Treg subset
    NA
    GSM1565838
    Treg.CD45RO+.CD161-.rep1
    Treg CD45RO+ CD161-
    Sorted ex vivo Treg subset
    NA
    GSM1565839
    Treg.CD45RO+.CD161-.rep2
    Treg CD45RO+ CD161-
    Sorted ex vivo Treg subset
    NA
    GSM1565840
    Treg.CD45RO+.CD161-.rep3
    Treg CD45RO+ CD161-
    Sorted ex vivo Treg subset
    NA
    GSM1565841
    Treg.CD45RO+.CD161+.rep1
    Treg CD45RO+ CD161+
    Sorted ex vivo Treg subset
    NA
    GSM1565842
    Treg.CD45RO+.CD161+.rep2
    Treg CD45RO+ CD161+
    Sorted ex vivo Treg subset
    NA
    GSM1565843
    Treg.CD45RO+.CD195-.rep1
    Treg CD45RO+ CD195-
    Sorted ex vivo Treg subset
    NA
    GSM1565844
    Treg.CD45RO+.CD195-.rep2
    Treg CD45RO+ CD195-
    Sorted ex vivo Treg subset
    NA
    GSM1565845
    Treg.CD45RO+.CD195+.rep1
    Treg CD45RO+ CD195+
    Sorted ex vivo Treg subset
    NA
    GSM1565846
    Treg.CD45RO+.CD195+.rep2
    Treg CD45RO+ CD195+
    Sorted ex vivo Treg subset
    NA
    GSM1565847
    Treg.CD45RO+.CD200-.rep1
    Treg CD45RO+ CD200-
    Sorted ex vivo Treg subset
    NA
    GSM1565848
    Treg.CD45RO+.CD200-.rep2
    Treg CD45RO+ CD200-
    Sorted ex vivo Treg subset
    NA
    GSM1565849
    Treg.CD45RO+.CD200-.rep3
    Treg CD45RO+ CD200-
    Sorted ex vivo Treg subset
    NA
    GSM1565850
    Treg.CD45RO+.CD200+.rep1
    Treg CD45RO+ CD200+
    Sorted ex vivo Treg subset
    NA
    GSM1565851
    Treg.CD45RO+.CD200+.rep2
    Treg CD45RO+ CD200+
    Sorted ex vivo Treg subset
    NA
    GSM1565852
    Treg.CD45RO+.CD200+.rep3
    Treg CD45RO+ CD200+
    Sorted ex vivo Treg subset
    NA
    GSM1565853
    Treg.CD45RO+.CD272-.rep1
    Treg CD45RO+ CD272-
    Sorted ex vivo Treg subset
    NA
    GSM1565854
    Treg.CD45RO+.CD272-.rep2
    Treg CD45RO+ CD272-
    Sorted ex vivo Treg subset
    NA
    GSM1565855
    Treg.CD45RO+.CD272-.rep3
    Treg CD45RO+ CD272-
    Sorted ex vivo Treg subset
    NA
    GSM1565856
    Treg.CD45RO+.CD272+.rep1
    Treg CD45RO+ CD272+
    Sorted ex vivo Treg subset
    NA
    GSM1565857
    Treg.CD45RO+.CD272+.rep2
    Treg CD45RO+ CD272+
    Sorted ex vivo Treg subset
    NA
    GSM1565858
    Treg.CD45RO+.CD272+.rep3
    Treg CD45RO+ CD272+
    Sorted ex vivo Treg subset
    NA
    GSM1565859
    Treg.CD45RO+.CD279-.rep1
    Treg CD45RO+ CD279-
    Sorted ex vivo Treg subset
    NA
    GSM1565860
    Treg.CD45RO+.CD279-.rep2
    Treg CD45RO+ CD279-
    Sorted ex vivo Treg subset
    NA
    GSM1565861
    Treg.CD45RO+.CD279-.rep3
    Treg CD45RO+ CD279-
    Sorted ex vivo Treg subset
    NA
    GSM1565862
    Treg.CD45RO+.CD279+.rep1
    Treg CD45RO+ CD279+
    Sorted ex vivo Treg subset
    NA
    GSM1565863
    Treg.CD45RO+.CD279+.rep2
    Treg CD45RO+ CD279+
    Sorted ex vivo Treg subset
    NA
    GSM1565864
    Treg.CD45RO+.CD279+.rep3
    Treg CD45RO+ CD279+
    Sorted ex vivo Treg subset
    NA
    GSM1565865
    Treg.CD45RO+.CD38-.rep1
    Treg CD45RO+ CD38-
    Sorted ex vivo Treg subset
    NA
    GSM1565866
    Treg.CD45RO+.CD38-.rep2
    Treg CD45RO+ CD38-
    Sorted ex vivo Treg subset
    NA
    GSM1565867
    Treg.CD45RO+.CD38-.rep3
    Treg CD45RO+ CD38-
    Sorted ex vivo Treg subset
    NA
    GSM1565868
    Treg.CD45RO+.CD38+.rep1
    Treg CD45RO+ CD38+
    Sorted ex vivo Treg subset
    NA
    GSM1565869
    Treg.CD45RO+.CD38+.rep2
    Treg CD45RO+ CD38+
    Sorted ex vivo Treg subset
    NA
    GSM1565870
    Treg.CD45RO+.CD38+.rep3
    Treg CD45RO+ CD38+
    Sorted ex vivo Treg subset
    NA
    GSM1565871
    Treg.CD45RO+.CD39-.CD26-.rep1
    Treg CD45RO+ CD39- CD26-
    Sorted ex vivo Treg subset
    NA
    GSM1565872
    Treg.CD45RO+.CD39-.CD26-.rep2
    Treg CD45RO+ CD39- CD26-
    Sorted ex vivo Treg subset
    NA
    GSM1565873
    Treg.CD45RO+.CD39-.CD26-.rep3
    Treg CD45RO+ CD39- CD26-
    Sorted ex vivo Treg subset
    NA
    GSM1565874
    Treg.CD45RO+.CD39-.CD26+.rep1
    Treg CD45RO+ CD39- CD26+
    Sorted ex vivo Treg subset
    NA
    GSM1565875
    Treg.CD45RO+.CD39-.CD26+.rep2
    Treg CD45RO+ CD39- CD26+
    Sorted ex vivo Treg subset
    NA
    GSM1565876
    Treg.CD45RO+.CD39-.CD26+.rep3
    Treg CD45RO+ CD39- CD26+
    Sorted ex vivo Treg subset
    NA
    GSM1565877
    Treg.CD45RO+.CD39+.CD26-.rep1
    Treg CD45RO+ CD39+ CD26-
    Sorted ex vivo Treg subset
    NA
    GSM1565878
    Treg.CD45RO+.CD39+.CD26-.rep2
    Treg CD45RO+ CD39+ CD26-
    Sorted ex vivo Treg subset
    NA
    GSM1565879
    Treg.CD45RO+.CD39+.CD26-.rep3
    Treg CD45RO+ CD39+ CD26-
    Sorted ex vivo Treg subset
    NA
    GSM1565880
    Treg.CD45RO+.CD39+.CD26+.rep1
    Treg CD45RO+ CD39+ CD26+
    Sorted ex vivo Treg subset
    NA
    GSM1565881
    Treg.CD45RO+.CD39+.CD26+.rep2
    Treg CD45RO+ CD39+ CD26+
    Sorted ex vivo Treg subset
    NA
    GSM1565882
    Treg.CD45RO+.CD39+.CD26+.rep3
    Treg CD45RO+ CD39+ CD26+
    Sorted ex vivo Treg subset
    NA
    GSM1565883
    Treg.CD45RO+.CD71-.rep1
    Treg CD45RO+ CD71-
    Sorted ex vivo Treg subset
    NA
    GSM1565884
    Treg.CD45RO+.CD71-.rep2
    Treg CD45RO+ CD71-
    Sorted ex vivo Treg subset
    NA
    GSM1565885
    Treg.CD45RO+.CD71-.rep3
    Treg CD45RO+ CD71-
    Sorted ex vivo Treg subset
    NA
    GSM1565886
    Treg.CD45RO+.CD71+.rep1
    Treg CD45RO+ CD71+
    Sorted ex vivo Treg subset
    NA
    GSM1565887
    Treg.CD45RO+.CD71+.rep2
    Treg CD45RO+ CD71+
    Sorted ex vivo Treg subset
    NA
    GSM1565888
    Treg.CD45RO+.CD71+.rep3
    Treg CD45RO+ CD71+
    Sorted ex vivo Treg subset
    NA
    GSM1565889
    Treg.CD45RO+.CLA-.rep1
    Treg CD45RO+ CLA-
    Sorted ex vivo Treg subset
    NA
    GSM1565890
    Treg.CD45RO+.CLA-.rep2
    Treg CD45RO+ CLA-
    Sorted ex vivo Treg subset
    NA
    GSM1565891
    Treg.CD45RO+.CLA-.rep3
    Treg CD45RO+ CLA-
    Sorted ex vivo Treg subset
    NA
    GSM1565892
    Treg.CD45RO+.CLA+.rep1
    Treg CD45RO+ CLA+
    Sorted ex vivo Treg subset
    NA
    GSM1565893
    Treg.CD45RO+.CLA+.rep2
    Treg CD45RO+ CLA+
    Sorted ex vivo Treg subset
    NA
    GSM1565894
    Treg.CD45RO+.CLA+.rep3
    Treg CD45RO+ CLA+
    Sorted ex vivo Treg subset
    NA
    GSM1565895
    Treg.CD45RO+.CXCR3-.CCR6-.rep1
    Treg CD45RO+ CXCR3- CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565896
    Treg.CD45RO+.CXCR3-.CCR6-.rep2
    Treg CD45RO+ CXCR3- CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565897
    Treg.CD45RO+.CXCR3-.CCR6+.rep1
    Treg CD45RO+ CXCR3- CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565898
    Treg.CD45RO+.CXCR3-.CCR6+.rep2
    Treg CD45RO+ CXCR3- CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565899
    Treg.CD45RO+.CXCR3-.CCR6+.rep3
    Treg CD45RO+ CXCR3- CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565900
    Treg.CD45RO+.CXCR3+.CCR6-.rep1
    Treg CD45RO+ CXCR3+ CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565901
    Treg.CD45RO+.CXCR3+.CCR6-.rep2
    Treg CD45RO+ CXCR3+ CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565902
    Treg.CD45RO+.CXCR3+.CCR6-.rep3
    Treg CD45RO+ CXCR3+ CCR6-
    Sorted ex vivo Treg subset
    NA
    GSM1565903
    Treg.CD45RO+.CXCR3+.CCR6+.rep1
    Treg CD45RO+ CXCR3+ CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565904
    Treg.CD45RO+.CXCR3+.CCR6+.rep2
    Treg CD45RO+ CXCR3+ CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565905
    Treg.CD45RO+.CXCR3+.CCR6+.rep3
    Treg CD45RO+ CXCR3+ CCR6+
    Sorted ex vivo Treg subset
    NA
    GSM1565906
    Treg.CD45RO+.HLADR-.rep1
    Treg CD45RO+ HLADR-
    Sorted ex vivo Treg subset
    NA
    GSM1565907
    Treg.CD45RO+.HLADR-.rep2
    Treg CD45RO+ HLADR-
    Sorted ex vivo Treg subset
    NA
    GSM1565908
    Treg.CD45RO+.HLADR-.rep3
    Treg CD45RO+ HLADR-
    Sorted ex vivo Treg subset
    NA
    GSM1565909
    Treg.CD45RO+.HLADR+.rep1
    Treg CD45RO+ HLADR+
    Sorted ex vivo Treg subset
    NA
    GSM1565910
    Treg.CD45RO+.HLADR+.rep2
    Treg CD45RO+ HLADR+
    Sorted ex vivo Treg subset
    NA
    GSM1565911
    Treg.CD45RO+.HLADR+.rep3
    Treg CD45RO+ HLADR+
    Sorted ex vivo Treg subset
    NA
    GSM1565912
    Treg.CD45RO+.ICOS-.rep1
    Treg CD45RO+ ICOS-
    Sorted ex vivo Treg subset
    NA
    GSM1565913
    Treg.CD45RO+.ICOS-.rep2
    Treg CD45RO+ ICOS-
    Sorted ex vivo Treg subset
    NA
    GSM1565914
    Treg.CD45RO+.ICOS-.rep3
    Treg CD45RO+ ICOS-
    Sorted ex vivo Treg subset
    NA
    GSM1565915
    Treg.CD45RO+.ICOS+.rep1
    Treg CD45RO+ ICOS+
    Sorted ex vivo Treg subset
    NA
    GSM1565916
    Treg.CD45RO+.ICOS+.rep2
    Treg CD45RO+ ICOS+
    Sorted ex vivo Treg subset
    NA
    GSM1565917
    Treg.CD45RO+.ICOS+.rep3
    Treg CD45RO+ ICOS+
    Sorted ex vivo Treg subset
    NA
    GSM1565918
    Treg.CD45RO+.Intb7-.CD49d-.rep1
    Treg CD45RO+ Intb7- CD49d-
    Sorted ex vivo Treg subset
    NA
    GSM1565919
    Treg.CD45RO+.Intb7-.CD49d-.rep2
    Treg CD45RO+ Intb7- CD49d-
    Sorted ex vivo Treg subset
    NA
    GSM1565920
    Treg.CD45RO+.Intb7-.CD49d-.rep3
    Treg CD45RO+ Intb7- CD49d-
    Sorted ex vivo Treg subset
    NA
    GSM1565921
    Treg.CD45RO+.Intb7-.CD49d+.rep1
    Treg CD45RO+ Intb7- CD49d+
    Sorted ex vivo Treg subset
    NA
    GSM1565922
    Treg.CD45RO+.Intb7-.CD49d+.rep2
    Treg CD45RO+ Intb7- CD49d+
    Sorted ex vivo Treg subset
    NA
    GSM1565923
    Treg.CD45RO+.Intb7-.CD49d+.rep3
    Treg CD45RO+ Intb7- CD49d+
    Sorted ex vivo Treg subset
    NA
    GSM1565924
    Treg.CD45RO+.Intb7+.CD49d+.rep1
    Treg CD45RO+ Intb7+ CD49d+
    Sorted ex vivo Treg subset
    NA
    GSM1565925
    Treg.CD45RO+.Intb7+.CD49d+.rep2
    Treg CD45RO+ Intb7+ CD49d+
    Sorted ex vivo Treg subset
    NA
    GSM1565926
    Treg.CD45RO+.Intb7+.CD49d+.rep3
    Treg CD45RO+ Intb7+ CD49d+
    Sorted ex vivo Treg subset
    NA
    GSM1565927
    Teff.CD45RO-_d1.rep1
    Teff CD45RO-_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565928
    Teff.CD45RO-_d1.rep2
    Teff CD45RO-_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565929
    Teff.CD45RO-_d1.rep3
    Teff CD45RO-_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565930
    Teff.CD45RO+_d1.rep1
    Teff CD45RO+_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565931
    Teff.CD45RO+_d1.rep2
    Teff CD45RO+_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565932
    Teff.CD45RO+_d1.rep3
    Teff CD45RO+_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565933
    Treg.CD45RO-_d1.rep1
    Treg CD45RO-_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565934
    Treg.CD45RO-_d1.rep2
    Treg CD45RO-_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565935
    Treg.CD45RO-_d1.rep3
    Treg CD45RO-_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565936
    Treg.CD45RO+_d1.rep1
    Treg CD45RO+_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565937
    Treg.CD45RO+_d1.rep2
    Treg CD45RO+_d1
    Sorted ex vivo Treg subset
    Day1
    GSM1565938
    Treg.CD45RO+_d1.rep3
    Treg CD45RO+_d1
    Sorted ex vivo Treg subset
    Day1

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