Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation-GSE11881
Immunosuppressive drugs can be completely withdrawn in up to 20% of liver transplant recipients, commonly referred to as ‘operationally’ tolerant. Immune characterization of these patients, however, has not been performed in detail, and we lack tests capable of identifying tolerant patients among recipients receiving maintenance immunosuppression. In the current study we have analyzed a variety of biological traits in peripheral blood of operationally tolerant liver recipients in an attempt to define a multiparameter ‘fingerprint’ of tolerance. Thus, we have performed peripheral blood gene expression profiling and extensive blood cell immunophenotyping on 16 operationally tolerant liver recipients, 16 recipients requiring on-going immunosuppressive therapy, and 10 healthy individuals. Microarray profiling identified a gene expression signature that could discriminate tolerant recipients from immunosuppression-dependent patients with high accuracy. This signature included genes encoding for ?d T-cell and NK receptors, and for proteins involved in cell proliferation arrest. In addition, tolerant recipients exhibited significantly greater numbers of circulating potentially regulatory T-cell subsets (CD4+CD25+ T-cells and Vd1+ T cells) than either non-tolerant patients or healthy individuals. Our data provide novel mechanistic insight on liver allograft operational tolerance, and constitute a first step in the search for a non-invasive diagnostic signature capable of predicting tolerance before undergoing drug weaning.
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The complete database comprised the expression measurements of 54 675 genes for nine operationally tolerant (TOL) and eight immunosuppression-dependent (ID) samples.
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MAS 5
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE11881
Sample ID | Grouping | Sample Title |
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GSM124575 | Non Tolerant PBMC | Nontolerant PBMCsNoTOLVHC1 |
GSM124646 | Tolerant PBMC | Tolerant PBMCTOLVHC2 |
GSM124648 | Tolerant PBMC | Tolerant PBMCTOLVHC7 |
GSM124675 | Non Tolerant PBMC | Nontolerant PBMCsNoTOLVHC9 |
GSM124748 | Non Tolerant PBMC | Nontolerant PBMCsNoTOLVHC10 |
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Sample ID | Grouping | Sample Title |
---|---|---|
GSM124575 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOLVHC1 |
GSM124646 | Tolerant PBMC |
Tolerant PBMCTOLVHC2 |
GSM124648 | Tolerant PBMC |
Tolerant PBMCTOLVHC7 |
GSM124675 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOLVHC9 |
GSM124748 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOLVHC10 |
GSM124753 | Tolerant PBMC |
Tolerant PBMCTOL14 |
GSM124833 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOL16 |
GSM124834 | Tolerant PBMC |
Tolerant PBMCTOL17 |
GSM124836 | Tolerant PBMC |
Tolerant PBMCTOL18 |
GSM124838 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOLVHC19 |
GSM124840 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOLVHC20 |
GSM124842 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOLVHC21 |
GSM124845 | Tolerant PBMC |
Tolerant PBMCTOL25 |
GSM124850 | Tolerant PBMC |
Tolerant PBMCTOLVHC26 |
GSM124851 | Tolerant PBMC |
Tolerant PBMCTOL27 |
GSM124853 | Tolerant PBMC |
Tolerant PBMCTOL28 |
GSM124863 | Non Tolerant PBMC |
Nontolerant PBMCsNoTOL15 |
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