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A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Kawasaki Datasets)-GSE100154

In Progress
Clinical
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Kawasaki Datasets)-GSE100154
Purpose

Development of a cost-effective and practical targeted transcriptional fingerprinting assay (TFA) for monitoring a diverse repertoire of immune responses identified in the human blood transcriptome relying on a modular transcriptional repertoire built on the basis of variations in transcript abundance measured on a genome wide scale in the blood of nearly 1000 subjects across 16 immunologic conditions.

Hypothesis

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Experimental Design

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Experimental Variables

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Controls

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Methods

RNA was extracted with MagMAX™ RNA Isolation Kit

Additional Information

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE100154

Microarray
Illumina HumanWG-6 v3
44 Samples Loaded: 44
Human (Homo sapiens)
Whole Blood
Kawasaki Disease
RNA was extracted with MagMAX™ RNA Isolation Kit
Sample Set Spreadsheet
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Samples Preview
Sample ID Illness GEOsampleID GEOID originalBRI BRIsampleID
4676163001_L Control GSM2672308 GSE100154 4676163001_L: whole blood-Kawasaki-Control 4676163001_L
4676163033_L Control GSM2672324 GSE100154 4676163033_L: whole blood-Kawasaki-Control 4676163033_L
4676163043_L Control GSM2672317 GSE100154 4676163043_L: whole blood-Kawasaki-Control 4676163043_L
4676163044_C Control GSM2672310 GSE100154 4676163044_C: whole blood-Kawasaki-Control 4676163044_C
4676163044_D Kawasaki GSM2672288 GSE100154 4676163044_D: whole blood-Kawasaki-Kawasaki 4676163044_D

Upload Files

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Browse Files

File
GSE100154_Sample_annotaion-whole blood-Kawasaki.csv
Sample Set Spreadsheet
Raw Signal
Raw Signal
  •   |  View in GXB »
Clinical Datasource
Links
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE100154

Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID Illness GEOsampleID GEOID OriginalBRI BRIsampleID Source Dataset
4676163047_L
Control
GSM2672327
GSE100154
4676163047_L: whole blood-Kawasaki-Control
4676163047_L
whole blood
Kawasaki
4676163048_A
Control
GSM2672320
GSE100154
4676163048_A: whole blood-Kawasaki-Control
4676163048_A
whole blood
Kawasaki
4676163048_B
Kawasaki
GSM2672296
GSE100154
4676163048_B: whole blood-Kawasaki-Kawasaki
4676163048_B
whole blood
Kawasaki
4676163033_L
Control
GSM2672324
GSE100154
4676163033_L: whole blood-Kawasaki-Control
4676163033_L
whole blood
Kawasaki
4676163048_E
Kawasaki
GSM2672290
GSE100154
4676163048_E: whole blood-Kawasaki-Kawasaki
4676163048_E
whole blood
Kawasaki
4676163048_F
Control
GSM2672313
GSE100154
4676163048_F: whole blood-Kawasaki-Control
4676163048_F
whole blood
Kawasaki
4676163043_L
Control
GSM2672317
GSE100154
4676163043_L: whole blood-Kawasaki-Control
4676163043_L
whole blood
Kawasaki
4676163044_C
Control
GSM2672310
GSE100154
4676163044_C: whole blood-Kawasaki-Control
4676163044_C
whole blood
Kawasaki
4676163060_G
Control
GSM2672307
GSE100154
4676163060_G: whole blood-Kawasaki-Control
4676163060_G
whole blood
Kawasaki
4676163044_D
Kawasaki
GSM2672288
GSE100154
4676163044_D: whole blood-Kawasaki-Kawasaki
4676163044_D
whole blood
Kawasaki
4676163044_E
Kawasaki
GSM2672303
GSE100154
4676163044_E: whole blood-Kawasaki-Kawasaki
4676163044_E
whole blood
Kawasaki
4676163044_F
Kawasaki
GSM2672297
GSE100154
4676163044_F: whole blood-Kawasaki-Kawasaki
4676163044_F
whole blood
Kawasaki
4676163044_G
Kawasaki
GSM2672291
GSE100154
4676163044_G: whole blood-Kawasaki-Kawasaki
4676163044_G
whole blood
Kawasaki
4676163044_H
Kawasaki
GSM2672284
GSE100154
4676163044_H: whole blood-Kawasaki-Kawasaki
4676163044_H
whole blood
Kawasaki
4676163060_L
Control
GSM2672323
GSE100154
4676163060_L: whole blood-Kawasaki-Control
4676163060_L
whole blood
Kawasaki
4676163044_I
Kawasaki
GSM2672299
GSE100154
4676163044_I: whole blood-Kawasaki-Kawasaki
4676163044_I
whole blood
Kawasaki
4676163044_J
Kawasaki
GSM2672293
GSE100154
4676163044_J: whole blood-Kawasaki-Kawasaki
4676163044_J
whole blood
Kawasaki
4676163088_D
Control
GSM2672305
GSE100154
4676163088_D: whole blood-Kawasaki-Control
4676163088_D
whole blood
Kawasaki
4676163044_K
Kawasaki
GSM2672286
GSE100154
4676163044_K: whole blood-Kawasaki-Kawasaki
4676163044_K
whole blood
Kawasaki
4676163088_E
Control
GSM2672321
GSE100154
4676163088_E: whole blood-Kawasaki-Control
4676163088_E
whole blood
Kawasaki
4676163044_L
Kawasaki
GSM2672301
GSE100154
4676163044_L: whole blood-Kawasaki-Kawasaki
4676163044_L
whole blood
Kawasaki
4676163088_F
Control
GSM2672314
GSE100154
4676163088_F: whole blood-Kawasaki-Control
4676163088_F
whole blood
Kawasaki
4676163045_A
Kawasaki
GSM2672295
GSE100154
4676163045_A: whole blood-Kawasaki-Kawasaki
4676163045_A
whole blood
Kawasaki
4676163045_B
Kawasaki
GSM2672289
GSE100154
4676163045_B: whole blood-Kawasaki-Kawasaki
4676163045_B
whole blood
Kawasaki
4676163045_C
Kawasaki
GSM2672304
GSE100154
4676163045_C: whole blood-Kawasaki-Kawasaki
4676163045_C
whole blood
Kawasaki
4676163045_D
Kawasaki
GSM2672298
GSE100154
4676163045_D: whole blood-Kawasaki-Kawasaki
4676163045_D
whole blood
Kawasaki
4676163045_E
Kawasaki
GSM2672292
GSE100154
4676163045_E: whole blood-Kawasaki-Kawasaki
4676163045_E
whole blood
Kawasaki
4676163045_F
Kawasaki
GSM2672285
GSE100154
4676163045_F: whole blood-Kawasaki-Kawasaki
4676163045_F
whole blood
Kawasaki
4676163045_G
Kawasaki
GSM2672300
GSE100154
4676163045_G: whole blood-Kawasaki-Kawasaki
4676163045_G
whole blood
Kawasaki
4676163045_H
Kawasaki
GSM2672294
GSE100154
4676163045_H: whole blood-Kawasaki-Kawasaki
4676163045_H
whole blood
Kawasaki
4676163064_L
Control
GSM2672316
GSE100154
4676163064_L: whole blood-Kawasaki-Control
4676163064_L
whole blood
Kawasaki
4676163045_I
Kawasaki
GSM2672287
GSE100154
4676163045_I: whole blood-Kawasaki-Kawasaki
4676163045_I
whole blood
Kawasaki
4676163045_J
Kawasaki
GSM2672302
GSE100154
4676163045_J: whole blood-Kawasaki-Kawasaki
4676163045_J
whole blood
Kawasaki
4676163045_L
Control
GSM2672326
GSE100154
4676163045_L: whole blood-Kawasaki-Control
4676163045_L
whole blood
Kawasaki
4676163046_A
Control
GSM2672319
GSE100154
4676163046_A: whole blood-Kawasaki-Control
4676163046_A
whole blood
Kawasaki
4676163046_B
Control
GSM2672312
GSE100154
4676163046_B: whole blood-Kawasaki-Control
4676163046_B
whole blood
Kawasaki
4676163046_C
Control
GSM2672306
GSE100154
4676163046_C: whole blood-Kawasaki-Control
4676163046_C
whole blood
Kawasaki
4676163046_D
Control
GSM2672322
GSE100154
4676163046_D: whole blood-Kawasaki-Control
4676163046_D
whole blood
Kawasaki
4676163046_E
Control
GSM2672315
GSE100154
4676163046_E: whole blood-Kawasaki-Control
4676163046_E
whole blood
Kawasaki
4676163046_F
Control
GSM2672309
GSE100154
4676163046_F: whole blood-Kawasaki-Control
4676163046_F
whole blood
Kawasaki
4676163046_G
Control
GSM2672325
GSE100154
4676163046_G: whole blood-Kawasaki-Control
4676163046_G
whole blood
Kawasaki
4676163046_H
Control
GSM2672318
GSE100154
4676163046_H: whole blood-Kawasaki-Control
4676163046_H
whole blood
Kawasaki
4676163046_I
Control
GSM2672311
GSE100154
4676163046_I: whole blood-Kawasaki-Control
4676163046_I
whole blood
Kawasaki
4676163001_L
Control
GSM2672308
GSE100154
4676163001_L: whole blood-Kawasaki-Control
4676163001_L
whole blood
Kawasaki

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