Sample Set Annotation Tool: A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Liver Transplant Datasets)-GSE100155

Study Design
Assay
Sample Info
Files
Info
Samples
Group Sets
Analysis

Purpose

Development of a cost-effective and practical targeted transcriptional fingerprinting assay (TFA) for monitoring a diverse repertoire of immune responses identified in the human blood transcriptome relying on a modular transcriptional repertoire built on the basis of variations in transcript abundance measured on a genome wide scale in the blood of nearly 1000 subjects across 16 immunologic conditions.

Hypothesis

Experimental Design

Experimental Variables

Controls

Methods

The data were normalised using average normalization with Genome Studio

Additional Information

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE100155

Expected Samples:

124 Samples Loaded: 124

Species

Human (Homo sapiens)

Sample Source

Whole Blood

Disease

Liver Transplant

Treatment Protocol

Growth Protocol

Extraction Protocol

RNA was extracted with MagMAX™ RNA Isolation Kit

Storage Conditions

Sample Set Spreadsheet

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Samples Preview

Sample ID	Illness	GEOsampleID	GEOID	originalBRI	BRIsampleID
4433719039_A	Control	GSM2672373	GSE100155	4433719039_A: whole blood-Liver Transplant-Control	4433719039_A
4433719039_B	Control	GSM2672365	GSE100155	4433719039_B: whole blood-Liver Transplant-Control	4433719039_B
4433719039_C	Control	GSM2672386	GSE100155	4433719039_C: whole blood-Liver Transplant-Control	4433719039_C
4433719039_D	Transplant	GSM2672329	GSE100155	4433719039_D: whole blood-Liver Transplant-Transplant	4433719039_D
4433719039_E	Transplant	GSM2672350	GSE100155	4433719039_E: whole blood-Liver Transplant-Transplant	4433719039_E

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File
GSE100155_Sample_annotaion- whole blood-Liver Transplant-Transplant.csv Sample Set Spreadsheet

Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID	Illness	GEOsampleID	GEOID	OriginalBRI	BRIsampleID	Source	Dataset
4447846103_I	Transplant	GSM2672355	GSE100155	4447846103_I: whole blood-Liver Transplant-Transplant	4447846103_I	whole blood	Liver Transplant
4447846103_J	Transplant	GSM2672430	GSE100155	4447846103_J: whole blood-Liver Transplant-Transplant	4447846103_J	whole blood	Liver Transplant
4447846103_K	Transplant	GSM2672416	GSE100155	4447846103_K: whole blood-Liver Transplant-Transplant	4447846103_K	whole blood	Liver Transplant
4447846103_L	Transplant	GSM2672401	GSE100155	4447846103_L: whole blood-Liver Transplant-Transplant	4447846103_L	whole blood	Liver Transplant
4447846104_A	Transplant	GSM2672435	GSE100155	4447846104_A: whole blood-Liver Transplant-Transplant	4447846104_A	whole blood	Liver Transplant
4447846104_B	Transplant	GSM2672421	GSE100155	4447846104_B: whole blood-Liver Transplant-Transplant	4447846104_B	whole blood	Liver Transplant
4447846104_C	Transplant	GSM2672406	GSE100155	4447846104_C: whole blood-Liver Transplant-Transplant	4447846104_C	whole blood	Liver Transplant
4447846104_D	Transplant	GSM2672440	GSE100155	4447846104_D: whole blood-Liver Transplant-Transplant	4447846104_D	whole blood	Liver Transplant
4447846104_E	Transplant	GSM2672436	GSE100155	4447846104_E: whole blood-Liver Transplant-Transplant	4447846104_E	whole blood	Liver Transplant
4447846104_F	Transplant	GSM2672447	GSE100155	4447846104_F: whole blood-Liver Transplant-Transplant	4447846104_F	whole blood	Liver Transplant
4447846104_G	Control	GSM2672362	GSE100155	4447846104_G: whole blood-Liver Transplant-Control	4447846104_G	whole blood	Liver Transplant
4447846104_H	Control	GSM2672382	GSE100155	4447846104_H: whole blood-Liver Transplant-Control	4447846104_H	whole blood	Liver Transplant
4447846104_I	Transplant	GSM2672347	GSE100155	4447846104_I: whole blood-Liver Transplant-Transplant	4447846104_I	whole blood	Liver Transplant
4447846104_J	Transplant	GSM2672338	GSE100155	4447846104_J: whole blood-Liver Transplant-Transplant	4447846104_J	whole blood	Liver Transplant
4447846104_K	Transplant	GSM2672391	GSE100155	4447846104_K: whole blood-Liver Transplant-Transplant	4447846104_K	whole blood	Liver Transplant
4447846104_L	Transplant	GSM2672426	GSE100155	4447846104_L: whole blood-Liver Transplant-Transplant	4447846104_L	whole blood	Liver Transplant
4447846144_A	Transplant	GSM2672412	GSE100155	4447846144_A: whole blood-Liver Transplant-Transplant	4447846144_A	whole blood	Liver Transplant
4447846144_B	Transplant	GSM2672397	GSE100155	4447846144_B: whole blood-Liver Transplant-Transplant	4447846144_B	whole blood	Liver Transplant
4447846144_C	Transplant	GSM2672431	GSE100155	4447846144_C: whole blood-Liver Transplant-Transplant	4447846144_C	whole blood	Liver Transplant
4447846144_D	Transplant	GSM2672417	GSE100155	4447846144_D: whole blood-Liver Transplant-Transplant	4447846144_D	whole blood	Liver Transplant
4447846144_E	Transplant	GSM2672442	GSE100155	4447846144_E: whole blood-Liver Transplant-Transplant	4447846144_E	whole blood	Liver Transplant
4433719039_A	Control	GSM2672373	GSE100155	4433719039_A: whole blood-Liver Transplant-Control	4433719039_A	whole blood	Liver Transplant
4433719039_B	Control	GSM2672365	GSE100155	4433719039_B: whole blood-Liver Transplant-Control	4433719039_B	whole blood	Liver Transplant
4433719039_C	Control	GSM2672386	GSE100155	4433719039_C: whole blood-Liver Transplant-Control	4433719039_C	whole blood	Liver Transplant
4433719039_D	Transplant	GSM2672329	GSE100155	4433719039_D: whole blood-Liver Transplant-Transplant	4433719039_D	whole blood	Liver Transplant
4433719039_E	Transplant	GSM2672350	GSE100155	4433719039_E: whole blood-Liver Transplant-Transplant	4433719039_E	whole blood	Liver Transplant
4433719039_F	Transplant	GSM2672341	GSE100155	4433719039_F: whole blood-Liver Transplant-Transplant	4433719039_F	whole blood	Liver Transplant
4433719039_G	Transplant	GSM2672332	GSE100155	4433719039_G: whole blood-Liver Transplant-Transplant	4433719039_G	whole blood	Liver Transplant
4433719039_H	Transplant	GSM2672402	GSE100155	4433719039_H: whole blood-Liver Transplant-Transplant	4433719039_H	whole blood	Liver Transplant
4433719039_I	Transplant	GSM2672387	GSE100155	4433719039_I: whole blood-Liver Transplant-Transplant	4433719039_I	whole blood	Liver Transplant
4433719039_J	Transplant	GSM2672422	GSE100155	4433719039_J: whole blood-Liver Transplant-Transplant	4433719039_J	whole blood	Liver Transplant
4433719039_K	Transplant	GSM2672408	GSE100155	4433719039_K: whole blood-Liver Transplant-Transplant	4433719039_K	whole blood	Liver Transplant
4433719047_B	Control	GSM2672377	GSE100155	4433719047_B: whole blood-Liver Transplant-Control	4433719047_B	whole blood	Liver Transplant
4433719047_C	Control	GSM2672368	GSE100155	4433719047_C: whole blood-Liver Transplant-Control	4433719047_C	whole blood	Liver Transplant
4433719047_D	Control	GSM2672360	GSE100155	4433719047_D: whole blood-Liver Transplant-Control	4433719047_D	whole blood	Liver Transplant
4433719047_E	Transplant	GSM2672353	GSE100155	4433719047_E: whole blood-Liver Transplant-Transplant	4433719047_E	whole blood	Liver Transplant
4433719047_F	Transplant	GSM2672345	GSE100155	4433719047_F: whole blood-Liver Transplant-Transplant	4433719047_F	whole blood	Liver Transplant
4433719047_G	Transplant	GSM2672336	GSE100155	4433719047_G: whole blood-Liver Transplant-Transplant	4433719047_G	whole blood	Liver Transplant
4433719047_H	Transplant	GSM2672356	GSE100155	4433719047_H: whole blood-Liver Transplant-Transplant	4433719047_H	whole blood	Liver Transplant
4433719047_I	Transplant	GSM2672393	GSE100155	4433719047_I: whole blood-Liver Transplant-Transplant	4433719047_I	whole blood	Liver Transplant
4433719047_J	Transplant	GSM2672428	GSE100155	4433719047_J: whole blood-Liver Transplant-Transplant	4433719047_J	whole blood	Liver Transplant
4433719047_K	Transplant	GSM2672414	GSE100155	4433719047_K: whole blood-Liver Transplant-Transplant	4433719047_K	whole blood	Liver Transplant
4433719047_L	Transplant	GSM2672399	GSE100155	4433719047_L: whole blood-Liver Transplant-Transplant	4433719047_L	whole blood	Liver Transplant
4433719071_C	Control	GSM2672380	GSE100155	4433719071_C: whole blood-Liver Transplant-Control	4433719071_C	whole blood	Liver Transplant
4433719071_D	Control	GSM2672371	GSE100155	4433719071_D: whole blood-Liver Transplant-Control	4433719071_D	whole blood	Liver Transplant
4433719071_E	Control	GSM2672363	GSE100155	4433719071_E: whole blood-Liver Transplant-Control	4433719071_E	whole blood	Liver Transplant
4433719071_F	Transplant	GSM2672348	GSE100155	4433719071_F: whole blood-Liver Transplant-Transplant	4433719071_F	whole blood	Liver Transplant
4433719071_G	Transplant	GSM2672339	GSE100155	4433719071_G: whole blood-Liver Transplant-Transplant	4433719071_G	whole blood	Liver Transplant
4433719071_H	Transplant	GSM2672330	GSE100155	4433719071_H: whole blood-Liver Transplant-Transplant	4433719071_H	whole blood	Liver Transplant
4433719071_I	Transplant	GSM2672433	GSE100155	4433719071_I: whole blood-Liver Transplant-Transplant	4433719071_I	whole blood	Liver Transplant
4433719071_J	Transplant	GSM2672419	GSE100155	4433719071_J: whole blood-Liver Transplant-Transplant	4433719071_J	whole blood	Liver Transplant
4433719071_K	Transplant	GSM2672404	GSE100155	4433719071_K: whole blood-Liver Transplant-Transplant	4433719071_K	whole blood	Liver Transplant
4447846029_A	Control	GSM2672384	GSE100155	4447846029_A: whole blood-Liver Transplant-Control	4447846029_A	whole blood	Liver Transplant
4433719071_L	Transplant	GSM2672389	GSE100155	4433719071_L: whole blood-Liver Transplant-Transplant	4433719071_L	whole blood	Liver Transplant
4447846029_B	Control	GSM2672375	GSE100155	4447846029_B: whole blood-Liver Transplant-Control	4447846029_B	whole blood	Liver Transplant
4433719072_A	Transplant	GSM2672424	GSE100155	4433719072_A: whole blood-Liver Transplant-Transplant	4433719072_A	whole blood	Liver Transplant
4447846029_C	Control	GSM2672367	GSE100155	4447846029_C: whole blood-Liver Transplant-Control	4447846029_C	whole blood	Liver Transplant
4447846029_D	Transplant	GSM2672343	GSE100155	4447846029_D: whole blood-Liver Transplant-Transplant	4447846029_D	whole blood	Liver Transplant
4447846029_E	Transplant	GSM2672334	GSE100155	4447846029_E: whole blood-Liver Transplant-Transplant	4447846029_E	whole blood	Liver Transplant
4433719072_D	Control	GSM2672383	GSE100155	4433719072_D: whole blood-Liver Transplant-Control	4433719072_D	whole blood	Liver Transplant
4433719072_E	Control	GSM2672374	GSE100155	4433719072_E: whole blood-Liver Transplant-Control	4433719072_E	whole blood	Liver Transplant
4433719072_F	Control	GSM2672366	GSE100155	4433719072_F: whole blood-Liver Transplant-Control	4433719072_F	whole blood	Liver Transplant
4447846029_H	Transplant	GSM2672407	GSE100155	4447846029_H: whole blood-Liver Transplant-Transplant	4447846029_H	whole blood	Liver Transplant
4433719072_G	Control	GSM2672357	GSE100155	4433719072_G: whole blood-Liver Transplant-Control	4433719072_G	whole blood	Liver Transplant
4447846029_I	Transplant	GSM2672392	GSE100155	4447846029_I: whole blood-Liver Transplant-Transplant	4447846029_I	whole blood	Liver Transplant
4433719072_H	Transplant	GSM2672351	GSE100155	4433719072_H: whole blood-Liver Transplant-Transplant	4433719072_H	whole blood	Liver Transplant
4447846029_J	Transplant	GSM2672449	GSE100155	4447846029_J: whole blood-Liver Transplant-Transplant	4447846029_J	whole blood	Liver Transplant
4433719072_I	Transplant	GSM2672342	GSE100155	4433719072_I: whole blood-Liver Transplant-Transplant	4433719072_I	whole blood	Liver Transplant
4447846029_K	Transplant	GSM2672444	GSE100155	4447846029_K: whole blood-Liver Transplant-Transplant	4447846029_K	whole blood	Liver Transplant
4433719072_J	Transplant	GSM2672333	GSE100155	4433719072_J: whole blood-Liver Transplant-Transplant	4433719072_J	whole blood	Liver Transplant
4447846029_L	Control	GSM2672358	GSE100155	4447846029_L: whole blood-Liver Transplant-Control	4447846029_L	whole blood	Liver Transplant
4433719072_K	Transplant	GSM2672410	GSE100155	4433719072_K: whole blood-Liver Transplant-Transplant	4433719072_K	whole blood	Liver Transplant
4447846064_A	Control	GSM2672378	GSE100155	4447846064_A: whole blood-Liver Transplant-Control	4447846064_A	whole blood	Liver Transplant
4433719072_L	Transplant	GSM2672395	GSE100155	4433719072_L: whole blood-Liver Transplant-Transplant	4433719072_L	whole blood	Liver Transplant
4447846064_B	Control	GSM2672369	GSE100155	4447846064_B: whole blood-Liver Transplant-Control	4447846064_B	whole blood	Liver Transplant
4447846064_C	Control	GSM2672361	GSE100155	4447846064_C: whole blood-Liver Transplant-Control	4447846064_C	whole blood	Liver Transplant
4447846064_D	Control	GSM2672381	GSE100155	4447846064_D: whole blood-Liver Transplant-Control	4447846064_D	whole blood	Liver Transplant
4447846064_E	Transplant	GSM2672354	GSE100155	4447846064_E: whole blood-Liver Transplant-Transplant	4447846064_E	whole blood	Liver Transplant
4447846064_F	Transplant	GSM2672346	GSE100155	4447846064_F: whole blood-Liver Transplant-Transplant	4447846064_F	whole blood	Liver Transplant
4447846064_G	Transplant	GSM2672427	GSE100155	4447846064_G: whole blood-Liver Transplant-Transplant	4447846064_G	whole blood	Liver Transplant
4447846064_H	Transplant	GSM2672413	GSE100155	4447846064_H: whole blood-Liver Transplant-Transplant	4447846064_H	whole blood	Liver Transplant
4447846064_I	Transplant	GSM2672398	GSE100155	4447846064_I: whole blood-Liver Transplant-Transplant	4447846064_I	whole blood	Liver Transplant
4447846064_J	Transplant	GSM2672432	GSE100155	4447846064_J: whole blood-Liver Transplant-Transplant	4447846064_J	whole blood	Liver Transplant
4447846064_K	Transplant	GSM2672439	GSE100155	4447846064_K: whole blood-Liver Transplant-Transplant	4447846064_K	whole blood	Liver Transplant
4447846064_L	Transplant	GSM2672451	GSE100155	4447846064_L: whole blood-Liver Transplant-Transplant	4447846064_L	whole blood	Liver Transplant
4447846100_A	Transplant	GSM2672446	GSE100155	4447846100_A: whole blood-Liver Transplant-Transplant	4447846100_A	whole blood	Liver Transplant
4447846100_B	Transplant	GSM2672337	GSE100155	4447846100_B: whole blood-Liver Transplant-Transplant	4447846100_B	whole blood	Liver Transplant
4447846100_C	Control	GSM2672372	GSE100155	4447846100_C: whole blood-Liver Transplant-Control	4447846100_C	whole blood	Liver Transplant
4447846100_D	Control	GSM2672364	GSE100155	4447846100_D: whole blood-Liver Transplant-Control	4447846100_D	whole blood	Liver Transplant
4447846100_E	Control	GSM2672385	GSE100155	4447846100_E: whole blood-Liver Transplant-Control	4447846100_E	whole blood	Liver Transplant
4447846100_G	Transplant	GSM2672328	GSE100155	4447846100_G: whole blood-Liver Transplant-Transplant	4447846100_G	whole blood	Liver Transplant
4447846100_H	Transplant	GSM2672418	GSE100155	4447846100_H: whole blood-Liver Transplant-Transplant	4447846100_H	whole blood	Liver Transplant
4447846100_I	Transplant	GSM2672403	GSE100155	4447846100_I: whole blood-Liver Transplant-Transplant	4447846100_I	whole blood	Liver Transplant
4447846100_J	Transplant	GSM2672388	GSE100155	4447846100_J: whole blood-Liver Transplant-Transplant	4447846100_J	whole blood	Liver Transplant
4447846100_K	Transplant	GSM2672423	GSE100155	4447846100_K: whole blood-Liver Transplant-Transplant	4447846100_K	whole blood	Liver Transplant
4447846100_L	Transplant	GSM2672441	GSE100155	4447846100_L: whole blood-Liver Transplant-Transplant	4447846100_L	whole blood	Liver Transplant
4447846101_A	Transplant	GSM2672437	GSE100155	4447846101_A: whole blood-Liver Transplant-Transplant	4447846101_A	whole blood	Liver Transplant
4447846101_D	Control	GSM2672376	GSE100155	4447846101_D: whole blood-Liver Transplant-Control	4447846101_D	whole blood	Liver Transplant
4447846101_F	Transplant	GSM2672349	GSE100155	4447846101_F: whole blood-Liver Transplant-Transplant	4447846101_F	whole blood	Liver Transplant
4447846101_G	Transplant	GSM2672340	GSE100155	4447846101_G: whole blood-Liver Transplant-Transplant	4447846101_G	whole blood	Liver Transplant
4447846101_H	Transplant	GSM2672409	GSE100155	4447846101_H: whole blood-Liver Transplant-Transplant	4447846101_H	whole blood	Liver Transplant
4447846101_I	Transplant	GSM2672394	GSE100155	4447846101_I: whole blood-Liver Transplant-Transplant	4447846101_I	whole blood	Liver Transplant
4447846101_J	Transplant	GSM2672429	GSE100155	4447846101_J: whole blood-Liver Transplant-Transplant	4447846101_J	whole blood	Liver Transplant
4447846101_K	Transplant	GSM2672415	GSE100155	4447846101_K: whole blood-Liver Transplant-Transplant	4447846101_K	whole blood	Liver Transplant
4447846101_L	Transplant	GSM2672448	GSE100155	4447846101_L: whole blood-Liver Transplant-Transplant	4447846101_L	whole blood	Liver Transplant
4447846102_A	Transplant	GSM2672400	GSE100155	4447846102_A: whole blood-Liver Transplant-Transplant	4447846102_A	whole blood	Liver Transplant
4447846102_B	Transplant	GSM2672443	GSE100155	4447846102_B: whole blood-Liver Transplant-Transplant	4447846102_B	whole blood	Liver Transplant
4447846102_C	Transplant	GSM2672438	GSE100155	4447846102_C: whole blood-Liver Transplant-Transplant	4447846102_C	whole blood	Liver Transplant
4447846102_D	Transplant	GSM2672331	GSE100155	4447846102_D: whole blood-Liver Transplant-Transplant	4447846102_D	whole blood	Liver Transplant
4447846102_F	Control	GSM2672359	GSE100155	4447846102_F: whole blood-Liver Transplant-Control	4447846102_F	whole blood	Liver Transplant
4447846102_G	Transplant	GSM2672352	GSE100155	4447846102_G: whole blood-Liver Transplant-Transplant	4447846102_G	whole blood	Liver Transplant
4447846102_H	Transplant	GSM2672344	GSE100155	4447846102_H: whole blood-Liver Transplant-Transplant	4447846102_H	whole blood	Liver Transplant
4447846102_I	Transplant	GSM2672434	GSE100155	4447846102_I: whole blood-Liver Transplant-Transplant	4447846102_I	whole blood	Liver Transplant
4447846102_J	Transplant	GSM2672420	GSE100155	4447846102_J: whole blood-Liver Transplant-Transplant	4447846102_J	whole blood	Liver Transplant
4447846102_K	Transplant	GSM2672405	GSE100155	4447846102_K: whole blood-Liver Transplant-Transplant	4447846102_K	whole blood	Liver Transplant
4447846102_L	Transplant	GSM2672390	GSE100155	4447846102_L: whole blood-Liver Transplant-Transplant	4447846102_L	whole blood	Liver Transplant
4447846103_A	Transplant	GSM2672425	GSE100155	4447846103_A: whole blood-Liver Transplant-Transplant	4447846103_A	whole blood	Liver Transplant
4447846103_B	Transplant	GSM2672411	GSE100155	4447846103_B: whole blood-Liver Transplant-Transplant	4447846103_B	whole blood	Liver Transplant
4447846103_C	Transplant	GSM2672450	GSE100155	4447846103_C: whole blood-Liver Transplant-Transplant	4447846103_C	whole blood	Liver Transplant
4447846103_D	Transplant	GSM2672445	GSE100155	4447846103_D: whole blood-Liver Transplant-Transplant	4447846103_D	whole blood	Liver Transplant
4447846103_E	Transplant	GSM2672396	GSE100155	4447846103_E: whole blood-Liver Transplant-Transplant	4447846103_E	whole blood	Liver Transplant
4447846103_F	Control	GSM2672379	GSE100155	4447846103_F: whole blood-Liver Transplant-Control	4447846103_F	whole blood	Liver Transplant
4447846103_G	Control	GSM2672370	GSE100155	4447846103_G: whole blood-Liver Transplant-Control	4447846103_G	whole blood	Liver Transplant
4447846103_H	Transplant	GSM2672335	GSE100155	4447846103_H: whole blood-Liver Transplant-Transplant	4447846103_H	whole blood	Liver Transplant

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