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SIDRA

GXB

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Significant Genes


2.0 Fold Change

Disease

Acute Infections (2)
 B-Cell Deficiency (1)
 Chlamydia trachomatis infection (1)
 COPD (1)
 Flu (1)
 H1N1 (1)
 Healthy (8)
 HIV (1)
 Juvenile Dermatomyositis (1)
 Kawasaki Disease (1)
 Kidney Transplant (1)
 Liver and Kidney Transplantation (1)
 Liver Transplant (15)
 Liver Transplantation (1)
 Malaria (1)
 Melanoma (1)
 MS (1)
 Pediatric SLE (1)
 Pregnancy (11)
 Primary Immunodeficiency (4)
 Psoriasis (1)
 Rheumatoid Arthritis (1)
 RSV (1)
 SARS-CoV-2 (1)
 Sepsis (3)
 SoJIA (1)
 Staph (1)
 Staphylococcus aureus (4)
 Tuberculosis (3)
 Vitamin D (1)

Sample Source

Amnion (1)
 B cells (1)
 Biopsy (1)
 CD4 T cells (2)
 CD8 T cells (2)
 Chorion (1)
 Cord blood (2)
 Decidua (1)
 Dendritic Cells (2)
 Epithelium (1)
 Fundus (1)
 Kidney Biopsy (1)
 Liver and Kidney Transplantation (1)
 Liver Biopsy (7)
 Liver Tissue (1)
 Lower Segment (1)
 Lung (1)
 Lung adenocarcinoma (1)
 Lung Biopsy (1)
 Maternal Blood (1)
 Monocytes (1)
 Neutrophils (1)
 NK Cells (1)
 PBMC (9)
 Peripheral blood (5)
 Peripheral Vein Blood (1)
 Placental Samples (2)
 Primary human bronchial epithelial cells (1)
 Regulatory T Cells (5)
 Renal Allograft Biopsy (1)
 SARS-CoV-2 (1)
 Umbilical Cord Blood (1)
 Whole Blood (36)

Species

Homo sapiens (72)

Principal Investigator

Basirudeen Kabeer (10)
 Mathieu Garand (18)

Platform

Affymetrix HG-U133A (6)
 Affymetrix HG-U133B (1)
 Affymetrix HG-U133_Plus_2 (11)
 Affymetrix HuGene 1.0 ST v1 (5)
 Affymetrix HuGene_2_1_st v1 (1)
 Agilent 014850 v1 (2)
 Agilent Agilent_012097_Human_1A_V2_G4110B v1 (1)
 Agilent Agilent_RISET_2_0 v1 (1)
 Ensembl Human v37 (1)
 Illumina HiSeq (1)
 Illumina Human-6 v2 (2)
 Illumina HumanHT-12 v3 (9)
 Illumina HumanHT-12 v4 (11)
 Illumina HumanRef-8 v1 (1)
 Illumina HumanRef-8 v3 (1)
 Illumina HumanWG-6 v2 (3)
 Illumina HumanWG-6 v3 (16)

Institution

Benaroya (2)
 GEO (71)

Gene Expression Browser

Sample Set Platform Species Disease Sample Source Sample Count  
A Common Peripheral Blood Gene-Set for Diagnosis and Prediction of Operational Tolerance in Pediatric and Adult Liver Transplantation - GSE30886 Homo sapiens Liver Transplant Peripheral blood 41
A common rejection module for acute rejection in multiple organs identifies novel therapeutics - GSE50058 Homo sapiens Kidney Transplant Renal Allograft Biopsy 101
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (B-cell deficiency Datasets)-GSE100156 Homo sapiens B-Cell Deficiency Whole Blood 33
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (COPD Datasets) - GSE100153 Homo sapiens COPD Whole Blood 43
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Flu Datasets)-GSE100160 Homo sapiens Flu Whole Blood 39
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (HIV Datasets)-GSE100151 Homo sapiens HIV Whole Blood 63
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Juvenile Dermatomyositis Datasets)-GSE100152   Juvenile Dermatomyositis Whole Blood 49
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Kawasaki Datasets)-GSE100154 Homo sapiens Kawasaki Disease Whole Blood 44
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Liver Transplant Datasets)-GSE100155 Homo sapiens Liver Transplant Whole Blood 124
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Melanoma Datasets)-GSE100158 Homo sapiens Melanoma Whole Blood 27
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (MS Datasets)-GSE100162 Homo sapiens MS Whole Blood 56
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Pregnancy Datasets)-GSE100157 Homo sapiens Pregnancy Whole Blood 45
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (RSV Datasets)-GSE100161 Homo sapiens RSV Whole Blood 84
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Sepsis Datasets)-GSE100159 Homo sapiens Sepsis Whole Blood 47
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (SLE Datasets)-GSE100163 Homo sapiens Pediatric SLE Whole Blood 69
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (SoJIA Datasets)-GSE100164 Homo sapiens SoJIA Whole Blood 85
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Staph Datasets)-GSE100165 Homo sapiens Staph Whole Blood 143
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (TB Datasets)-GSE100166 Homo sapiens Tuberculosis Whole Blood 34
Analysis of the impact of the method of cell selection on the gene expression profile of human CD4 and CD8 T cells-GSE14926 Homo sapiens Healthy CD4 T cells, CD8 T cells 19
Blood immunomonitoring uncovers pregnancy-induced immune programs and their dysregulation in lupus pregnancy destined for complications-GSE108497 Homo sapiens Pregnancy Whole Blood 543
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